Boiled And Baked Protein Bagels

Highlighted under: Homemade Baking Inspiration

I always wanted a bagel that doesn’t compromise on nutrition. These Boiled And Baked Protein Bagels are my answer—they combine the irresistible chewy texture of traditional bagels with a healthy protein boost. I love how these bagels are super satisfying, making them perfect for breakfast or a snack. Plus, they’re surprisingly easy to make at home with just a handful of ingredients. Give them a try, and experience a truly wholesome treat that doesn’t take hours to prepare!

Thea Montgomery

Created by

Thea Montgomery

Last updated on 2026-02-15T01:03:36.303Z

When I first attempted to create these bagels, I was overwhelmed by how traditional methods often called for lengthy preparations. After several trials, I discovered that boiling the bagels before baking gives them that classic chewiness I craved. Each bite delivers a unique texture that pairs beautifully with various toppings.

One of my favorite tips is to experiment with different toppings. I’ve used everything from everything seasoning to sesame seeds, and each version brings a delightful twist. Trust me, once you master this method, you’ll find yourself whipping up these bagels often!

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Why You Will Love This Recipe

  • High-protein content to keep you full longer
  • Chewy texture that rivals your favorite bagel shop
  • Versatile toppings for endless variations

Understanding Ingredient Roles

Each ingredient in these Boiled And Baked Protein Bagels plays a crucial role in achieving that perfect bagel consistency. The whole wheat flour adds a nutty flavor and provides the necessary structure, while the protein powder not only boosts the nutritional profile but also contributes to the chewy texture. If you're looking for a gluten-free version, consider using a gluten-free all-purpose flour blend combined with a gluten-free protein powder to maintain the consistency.

Honey or agave syrup serves as a natural sweetener that works to activate the yeast, helping the bagels rise. This sweetener can also enhance the browning during baking, giving your bagels a beautiful golden hue. If you want to control the sweetness, feel free to reduce the amount or substitute with a sugar alternative like monk fruit sweetener.

Mastering the Boiling Technique

Boiling the bagels is an essential step to achieve that classic chewy crust. The addition of baking soda in the boiling water raises the pH, helping to create a glossy finish. Ensure the water is at a rolling boil before adding the bagels. I suggest using a large pot to accommodate all four bagels without crowding—each bagel should have enough room to bubble freely without sticking together.

While boiling, keep an eye on the timer—one minute on each side is sufficient. Over-boiling can lead to a gummy texture, while under-boiling might make the bagels too dense. A quick visual cue: look for a slight puffing up and a smooth, round appearance before you remove them from the water.

Serving and Variations

These protein bagels are incredibly versatile. Serve them fresh out of the oven with a spread of cream cheese or your favorite nut butter for a satisfying breakfast. You can also slice them thinly, toast them lightly, and layer them with smoked salmon, avocado, or fresh veggies for a nutritious lunch option. The toppings you choose can elevate the flavor—experiment with different seeds or seasoning blends to match your personal preference.

If you want to switch up the flavors, consider adding spices like garlic powder or onion powder to the dough for a savory twist. Alternatively, mix in ingredients like shredded cheese or finely chopped herbs. These changes can elevate the overall taste profile while still keeping the bagels healthy and protein-packed.

Ingredients

Ingredients

For the Bagels

  • 1 cup warm water (110°F)
  • 2 teaspoons active dry yeast
  • 2 tablespoons honey or agave syrup
  • 3 cups whole wheat flour
  • 1/2 cup protein powder
  • 1 teaspoon salt

For Boiling

  • 4 quarts water
  • 2 tablespoons baking soda

For Topping

  • Sesame seeds, poppy seeds, or everything bagel seasoning

Instructions

Instructions

Prepare the Dough

In a bowl, combine warm water, yeast, and honey. Let it sit for 5 minutes until frothy. In a large mixing bowl, combine whole wheat flour, protein powder, and salt. Pour the yeast mixture into the dry ingredients and mix until a dough forms.

Knead and Rise

Turn the dough onto a floured surface and knead for about 5 minutes until smooth. Place the dough in a greased bowl, cover, and let it rise in a warm area for 20 minutes.

Shape the Bagels

Once risen, divide the dough into four equal pieces. Shape each piece into a ball, then poke a hole in the center to create a bagel shape. Ensure the hole is large enough since it will shrink during boiling.

Boil the Bagels

In a large pot, bring water and baking soda to a boil. Carefully drop the bagels into the boiling water, cooking for 1 minute on each side. Remove with a slotted spoon and place on a baking sheet.

Add Toppings and Bake

Preheat your oven to 425°F (220°C). Sprinkle your desired toppings on each bagel. Bake in the oven for 15-20 minutes, or until golden brown.

Pro Tips

  • For extra flavor, consider adding spices or herbs to the dough itself before the first rise.

Storage and Make-Ahead Tips

These bagels can be stored at room temperature in an airtight container for up to three days. For longer storage, consider freezing them. Once the bagels cool completely, wrap them individually in plastic wrap, then place them in a freezer-safe bag. When you're ready to enjoy, simply thaw them at room temperature or pop them in the toaster straight from the freezer for a quick breakfast.

If you're planning to make these bagels in advance, prep the dough and shape them the day before, then refrigerate overnight. On baking day, just boil and bake them as directed, which will save you significant time in the morning.

Troubleshooting Common Issues

If your bagels aren’t rising during the first proofing, double-check that your yeast is active. Always make sure your water is at the right temperature—too hot can kill the yeast, while too cold won't activate it. If you find your bagels are too dense, that could be a sign of over-kneading or using too much flour. The dough should feel soft and elastic without being sticky, so adjust the flour as necessary.

During baking, if your bagels are browning too quickly, lower the oven temperature slightly. Conversely, if they aren’t developing a good color after the recommended time, you can increase the temperature towards the end of baking to achieve a beautiful golden finish without compromising the soft interior.

Questions About Recipes

→ Can I use regular flour instead of whole wheat flour?

Yes, but using whole wheat flour enhances the nutritional profile of the bagels.

→ How do I store leftover bagels?

Store in an airtight container at room temperature for up to 2 days or in the fridge for a week.

→ Can I freeze these bagels?

Absolutely! Freeze them in a zip-top freezer bag, and they should stay fresh for up to 3 months.

→ What can I use instead of honey?

You can substitute honey with agave syrup or maple syrup for a vegan option.

Boiled And Baked Protein Bagels

I always wanted a bagel that doesn’t compromise on nutrition. These Boiled And Baked Protein Bagels are my answer—they combine the irresistible chewy texture of traditional bagels with a healthy protein boost. I love how these bagels are super satisfying, making them perfect for breakfast or a snack. Plus, they’re surprisingly easy to make at home with just a handful of ingredients. Give them a try, and experience a truly wholesome treat that doesn’t take hours to prepare!

Prep Time15 minutes
Cooking Duration20 minutes
Overall Time35 minutes

Created by: Thea Montgomery

Recipe Type: Homemade Baking Inspiration

Skill Level: Intermediate

Final Quantity: 4 bagels

What You'll Need

For the Bagels

  1. 1 cup warm water (110°F)
  2. 2 teaspoons active dry yeast
  3. 2 tablespoons honey or agave syrup
  4. 3 cups whole wheat flour
  5. 1/2 cup protein powder
  6. 1 teaspoon salt

For Boiling

  1. 4 quarts water
  2. 2 tablespoons baking soda

For Topping

  1. Sesame seeds, poppy seeds, or everything bagel seasoning

How-To Steps

Step 01

In a bowl, combine warm water, yeast, and honey. Let it sit for 5 minutes until frothy. In a large mixing bowl, combine whole wheat flour, protein powder, and salt. Pour the yeast mixture into the dry ingredients and mix until a dough forms.

Step 02

Turn the dough onto a floured surface and knead for about 5 minutes until smooth. Place the dough in a greased bowl, cover, and let it rise in a warm area for 20 minutes.

Step 03

Once risen, divide the dough into four equal pieces. Shape each piece into a ball, then poke a hole in the center to create a bagel shape. Ensure the hole is large enough since it will shrink during boiling.

Step 04

In a large pot, bring water and baking soda to a boil. Carefully drop the bagels into the boiling water, cooking for 1 minute on each side. Remove with a slotted spoon and place on a baking sheet.

Step 05

Preheat your oven to 425°F (220°C). Sprinkle your desired toppings on each bagel. Bake in the oven for 15-20 minutes, or until golden brown.

Extra Tips

  1. For extra flavor, consider adding spices or herbs to the dough itself before the first rise.

Nutritional Breakdown (Per Serving)

  • Calories: 220 kcal
  • Total Fat: 2g
  • Saturated Fat: 0g
  • Cholesterol: 0mg
  • Sodium: 180mg
  • Total Carbohydrates: 44g
  • Dietary Fiber: 5g
  • Sugars: 1g
  • Protein: 10g